Detailed annotation info for rmi_gut_contig10612
Annotation NameDNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Ixodes scapularis RepID=B7P467_IXOSC
Score548&emsp
E-value3e-54
% Sequence Identity87% (95/109)
LocusRNA polymerase III
EC Number2.7.7.6
COG Function Transcription
KEGG Pathway Metabolic pathways Purine metabolism Pyrimidine metabolism RNA polymerase
Source (Query=rmi_gut_contig10612)AccessionDescriptionScoreE-value% Sequence IdentityLocusEC NumberInformative HitFunction/PathwayGeneOntology
AutoFACTrmi_gut_contig10612DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Ixodes scapularis RepID=B7P467_IXOSC5483e-5487% (95/109)RNA polymerase III2.7.7.61GO:0003676|nucleic acid binding|IEA; GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0006350|transcription|IEA; GO:0008270|zinc ion binding|IEA; GO:0030528|transcription regulator activity|IEA; GO:0045449|regulation of transcription|IEA; GO:0046872|metal ion binding|IEA
SSU No hits found0
LSU No hits found0
uniref90UniRef90_B7P467 DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Ixodes scapularis RepID=B7P467_IXOSC5483e-5487% (95/109)1GO:0003676|nucleic acid binding|IEA; GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0006350|transcription|IEA; GO:0008270|zinc ion binding|IEA; GO:0030528|transcription regulator activity|IEA; GO:0045449|regulation of transcription|IEA; GO:0046872|metal ion binding|IEA
uniref100UniRef100_B7P467 DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P467_IXOSC5484e-5487% (95/109)1GO:0003676|nucleic acid binding|IEA; GO:0003677|DNA binding|IEA; GO:0003899|DNA-directed RNA polymerase activity|IEA; GO:0006350|transcription|IEA; GO:0008270|zinc ion binding|IEA; GO:0030528|transcription regulator activity|IEA; GO:0045449|regulation of transcription|IEA; GO:0046872|metal ion binding|IEA
nrXP_002405456 RNA polymerase III [Ixodes scapularis]gb|EEC01389.1| RNA polymerase III [Ixodes scapularis]5485e-5487% (95/109)1
cogYDR045c [K] COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS2843e-2550% (58/114)1 Transcription
keggisc:IscW_ISCW001464 RNA polymerase III; K03019 DNA-directed RNA polymerase III subunit C11 [EC:2.7.7.6]5482e-5487% (95/109)RNA polymerase III2.7.7.61 Metabolic pathways Purine metabolism Pyrimidine metabolism RNA polymerase
smart00440 smart00440, ZnF_C2C2, C2C2 Zinc finger; Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases1823e-1660% (24/40)ZnF_C2C21
smart200661smart00661, RPOL9, RNA polymerase subunit 9; 1421e-1139% (20/51)RPOL92
pfamPF01096 pfam01096, TFIIS_C, Transcription factor S-II (TFIIS)1612e-1252% (21/40)TFIIS_C1
pfam2PF06842 pfam06842, DUF1242, Protein of unknown function (DUF1242)1055e-0647% (18/38)DUF12422